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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs11096484 chr2:17985852 A/G 3.82E-8 407 7.33 16.6 15.17 KM Plot
LGG rs11110986 chr12:102125090 G/A 3.18E-5 402 13.85 19.33 21.25 KM Plot
LGG rs11118187 chr1:219156010 G/A 0.000178 407 14.77 18.8 18.63 KM Plot
LGG rs11118195 chr1:219175366 C/T 0.000173 406 14.77 19.03 18.63 KM Plot
LGG rs111232831 chr2:60595921 T/C 5.16E-5 404 15.35 17.7 8.03 KM Plot
LGG rs111248102 chr4:84464090 G/A 8.88E-16 402 14.85 18.27 5.17 KM Plot
LGG rs11125563 chr2:55543840 C/T 4.29E-5 404 10.17 16.23 15.17 KM Plot
LGG rs111255903 chr20:61495526 C/T 2.25E-6 401 15.67 15.13 5.5 KM Plot
LGG rs111308650 chr7:55965096 C/T 1.83E-10 405 15.2 16.23 7.8 KM Plot
LGG rs111315474 chr21:45496609 G/T 1.95E-8 407 15.47 14.45 3.97 KM Plot
LGG rs111317816 chr7:55922586 T/C 0 401 15.2 15.93 3.77 KM Plot
LGG rs11135388 chr5:92858290 A/T 0.000111 405 14.93 17.07 17.93 KM Plot
LGG rs11135406 chr5:93950050 T/C 4.46E-5 404 14.78 17.73 9.8 KM Plot
LGG rs11135409 chr5:93981439 G/A 4.32E-5 407 14.78 17.63 9.8 KM Plot
LGG rs11136728 chr8:425796 T/G 2.67E-6 390 15.63 14.48 5.17 KM Plot